Hi,
for s4everal years I used PEAKS and could identify a number of modifications
and also amino acid exchanges in APO A1. Several of them had been reported
already (it was a sample of mixed HDL preparations). Also modifications were
reported well and could be manually verified. Try PEAKS - trial version
available - with your data, I am totally sure it will help you.
Manfred (retired but still active)
Am 14.06.21, 22:26 schrieb "ABRF Discussion Forum im Auftrag von Kym Faull"
<email obscured> im Auftrag von <email obscured>>:
> We have DDA nLC-MSMS data from QE-Plus. We have a heterogenous
modification of Ser that Mascot is failing to identify. Can anyone recommend
software that handles this problem ?
Any and all advice will be appreciated.
Kym Francis Faull, Ph.D.
Director, Pasarow Mass Spectrometry Laboratory
Jane and Terry Semel Institute for Neuroscience and Human Behavior at UCLA
Professor Emeritus on Recall, Department of Psychiatry and Biobehavioral
Sciences
David Geffen School of Medicine at UCLA
Telephone: (310) 206 7881 (office)
Telephone: (310) 206 7886 (laboratory)
Facsimile: (310) 206 2161
Electronic mail: <email obscured> <email obscured>>
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